ICCAS OpenIR
Function prediction for DNA-/RNA-binding proteins, GPCRs, and drug ADME-associated proteins by SVM
Cai, Congzhong1; Xiao, Hanguang1,2; Yuan, Qianfei1; Liu, Xinghua1; Wen, Yufeng1
2008-06-01
Source PublicationPROTEIN AND PEPTIDE LETTERS
ISSN0929-8665
Volume15Issue:5Pages:463-468
AbstractThis paper explores the use of support vector machine (SVM) for protein function prediction. Studies are conducted on several groups of proteins with different functions including DNA-binding proteins, RNA-binding proteins, G-protein coupled receptors, drug absorption proteins, drug metabolizing enzymes, drug distribution and excretion proteins. The computed accuracy for the prediction of these proteins is found to be in the range of 82.32% to 99.7%, which illustrates the potential of SVM in facilitating protein function prediction.
KeywordProtein Function Prediction Dna-binding Proteins Rna-binding Proteins G-protein Coupled Receptors (Gpcrs) Drug Absorption Proteins Drug Metabolizing Enzymes Drug Distribution And Excretion Proteins Support Vector Machine (Svm)
Indexed ByISTP ; SCI
Language英语
WOS IDWOS:000257467200007
PublisherBENTHAM SCIENCE PUBL LTD
Citation statistics
Cited Times:2[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.iccas.ac.cn/handle/121111/64530
Collection中国科学院化学研究所
Corresponding AuthorCai, Congzhong
Affiliation1.Chongqing Univ, Dept Appl Phys, Chongqing 400044, Peoples R China
2.Chongqing Inst Technol, Dept Appl Phys, Chongqing 400054, Peoples R China
Recommended Citation
GB/T 7714
Cai, Congzhong,Xiao, Hanguang,Yuan, Qianfei,et al. Function prediction for DNA-/RNA-binding proteins, GPCRs, and drug ADME-associated proteins by SVM[J]. PROTEIN AND PEPTIDE LETTERS,2008,15(5):463-468.
APA Cai, Congzhong,Xiao, Hanguang,Yuan, Qianfei,Liu, Xinghua,&Wen, Yufeng.(2008).Function prediction for DNA-/RNA-binding proteins, GPCRs, and drug ADME-associated proteins by SVM.PROTEIN AND PEPTIDE LETTERS,15(5),463-468.
MLA Cai, Congzhong,et al."Function prediction for DNA-/RNA-binding proteins, GPCRs, and drug ADME-associated proteins by SVM".PROTEIN AND PEPTIDE LETTERS 15.5(2008):463-468.
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